Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7302

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7301: 15669 - Hypothetical Protein, at 1346160 to 1348267 15669 mRNA_7302: 15670 - Hypothetical Protein, at 1348757 to 1350807 15670 mRNA_7303: 15671 - KOG1269 SAM-dependent methyltransferases, at 1350964 to 1351884 15671

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,347,817 + 15669 mRNA_7301 0.79 -0.6
1,347,854 + 15669 mRNA_7301 0.80 0.5
1,347,855 + 15669 mRNA_7301 0.80 -0.1
1,348,083 + -0.8
1,348,139 + 2.1
1,348,158 + -0.9
1,348,230 - 0.5
1,348,234 + 0.5
1,348,241 + -0.4
1,348,385 - -0.3
1,348,404 - 2.8
1,348,544 + -0.3
1,348,592 + -0.1
1,348,690 + -1.3
1,348,752 + 0.6
1,348,792 + 0.6
1,348,831 - -0.7
1,348,833 + -0.4
1,348,837 - -0.7
1,348,848 - 0.3
1,348,850 + -0.5
1,348,871 - 0.8
1,348,921 + -2.4
1,348,962 - 15670 mRNA_7302 0.10 -0.0
1,349,026 + 15670 mRNA_7302 0.13 1.3
1,349,099 + 15670 mRNA_7302 0.17 0.3
1,349,116 + 15670 mRNA_7302 0.18 -0.7
1,349,134 + 15670 mRNA_7302 0.18 -0.5
1,349,263 + 15670 mRNA_7302 0.25 -1.0
1,349,264 + 15670 mRNA_7302 0.25 -0.3
1,349,267 - 15670 mRNA_7302 0.25 -0.3
1,349,268 + 15670 mRNA_7302 0.25 0.5
1,349,289 + 15670 mRNA_7302 0.26 0.6
1,349,292 + 15670 mRNA_7302 0.26 -2.3
1,349,349 + 15670 mRNA_7302 0.29 -0.4
1,349,420 - 15670 mRNA_7302 0.32 -0.5
1,349,458 + 15670 mRNA_7302 0.34 0.5
1,349,474 - 15670 mRNA_7302 0.35 -1.0
1,349,522 - 15670 mRNA_7302 0.37 -0.0
1,349,523 + 15670 mRNA_7302 0.37 -0.3
1,349,747 - 15670 mRNA_7302 0.48 1.7
1,349,858 - 15670 mRNA_7302 0.54 0.0
1,349,868 - 15670 mRNA_7302 0.54 -0.2
1,349,909 + 15670 mRNA_7302 0.56 -0.1
1,349,971 + 15670 mRNA_7302 0.59 -0.8
1,350,020 + 15670 mRNA_7302 0.62 -0.9
1,350,023 - 15670 mRNA_7302 0.62 2.4
1,350,036 - 15670 mRNA_7302 0.62 0.1
1,350,041 + 15670 mRNA_7302 0.63 -0.9
1,350,203 + 15670 mRNA_7302 0.71 -0.4
1,350,265 - 15670 mRNA_7302 0.74 -0.7
1,350,310 + 15670 mRNA_7302 0.76 0.9
1,350,313 - 15670 mRNA_7302 0.76 0.2
1,350,490 - 15670 mRNA_7302 0.84 0.5
1,350,504 + 15670 mRNA_7302 0.85 1.9
1,350,542 - 15670 mRNA_7302 0.87 -1.1
1,350,546 + 15670 mRNA_7302 0.87 0.4
1,350,623 + 0.9
1,350,623 + -1.5
1,350,623 + 0.6
1,350,641 - -1.1
1,350,736 - -0.3
1,350,770 + -0.7
1,350,898 + 0.4
1,350,918 - 1.1
1,350,919 - -0.6
1,350,927 + -0.2
1,351,008 + 2.0
1,351,024 - -0.2
1,351,090 + 15671 mRNA_7303 0.14 0.3
1,351,196 - 15671 mRNA_7303 0.25 -0.6
1,351,252 - 15671 mRNA_7303 0.31 -0.4
1,351,334 - 15671 mRNA_7303 0.40 2.1
1,351,338 + 15671 mRNA_7303 0.41 -0.5
1,351,575 - 15671 mRNA_7303 0.66 -0.0
1,351,588 - 15671 mRNA_7303 0.68 -0.3