Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7256

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7255: 15623 - Hypothetical Protein, at 1227615 to 1231158 15623 mRNA_7256: 15624 - BLAST protein kinase-like domain containing protein [Rh..., at 1231458 to 1233472 15624 mRNA_7257: 15625 - ProSiteProfiles-PH domain profile.-PS50003,SMART-Pleckstrin homology domain.-SM00233,SUPERFAMILY--SSF50729, at 1233566 to 1236513 15625

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,230,715 - 15623 mRNA_7255 0.87 0.3
1,230,772 - 15623 mRNA_7255 0.89 1.0
1,230,777 + 15623 mRNA_7255 0.89 2.3
1,230,809 + -2.1
1,230,812 - 0.3
1,230,813 - -1.3
1,230,923 - -1.1
1,230,952 + -2.6
1,231,086 + -2.5
1,231,192 - -0.8
1,231,301 - -0.5
1,231,322 + -1.4
1,231,352 - -0.3
1,231,370 - 0.2
1,231,371 + -0.7
1,231,374 + 0.6
1,231,643 - -1.4
1,231,730 - 15624 mRNA_7256 0.13 0.4
1,231,949 + 15624 mRNA_7256 0.24 -0.3
1,231,955 + 15624 mRNA_7256 0.25 0.2
1,232,185 - 15624 mRNA_7256 0.36 -0.1
1,232,401 - 15624 mRNA_7256 0.47 -1.3
1,232,655 - 15624 mRNA_7256 0.59 -0.4
1,232,939 - 15624 mRNA_7256 0.73 0.3
1,232,957 - 15624 mRNA_7256 0.74 2.3
1,233,295 - -2.2
1,233,446 - 0.0
1,233,447 - -1.0
1,233,503 - 0.1
1,233,558 + -0.2
1,233,800 + -0.5
1,233,846 - -0.7
1,234,023 + 15625 mRNA_7257 0.16 1.1
1,234,176 - 15625 mRNA_7257 0.21 -1.2
1,234,283 + 15625 mRNA_7257 0.24 -0.6
1,234,336 - 15625 mRNA_7257 0.26 -0.8
1,234,407 + 15625 mRNA_7257 0.29 -0.4
1,234,415 - 15625 mRNA_7257 0.29 -1.3
1,234,416 + 15625 mRNA_7257 0.29 -0.2