Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7170

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7169: 15537 - K13137 STRAP, UNRIP serine-threonine kinase receptor-associated protein, at 1038666 to 1040206 15537 mRNA_7170: 15538 - Hypothetical Protein, at 1040461 to 1043299 15538 mRNA_7171: 15539 - Hypothetical Protein, at 1043554 to 1044696 15539

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,039,688 - 15537 mRNA_7169 0.66 0.1
1,040,270 - 1.7
1,040,291 - -0.4
1,040,433 + 0.1
1,040,435 - 0.4
1,040,574 + -0.5
1,040,591 - -1.3
1,040,595 - -0.9
1,040,596 + -2.4
1,040,739 + 0.6
1,040,993 - 15538 mRNA_7170 0.19 0.1
1,041,023 - 15538 mRNA_7170 0.20 -0.8
1,041,186 - 15538 mRNA_7170 0.26 -1.0
1,041,613 - 15538 mRNA_7170 0.41 -1.8
1,041,615 - 15538 mRNA_7170 0.41 0.5
1,041,899 - 15538 mRNA_7170 0.51 0.0
1,042,905 + 15538 mRNA_7170 0.86 -0.2
1,043,201 - 2.1
1,043,245 + 0.7
1,043,387 + -0.8
1,043,460 + 0.0
1,043,701 - 15539 mRNA_7171 0.13 -1.3
1,043,750 + 15539 mRNA_7171 0.17 -1.8
1,043,899 - 15539 mRNA_7171 0.30 0.7
1,044,220 - 15539 mRNA_7171 0.58 -1.4