Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7163

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7162: 15530 - ProSiteProfiles-Zinc finger C3H1-type profile.-PS50103, at 1025200 to 1027264 15530 mRNA_7163: 15531 - Hypothetical Protein, at 1027440 to 1028287 15531 mRNA_7164: 15532 - K13117 DHX35 ATP-dependent RNA helicase DDX35, at 1028429 to 1031367 15532

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,026,584 - 15530 mRNA_7162 0.67 1.8
1,026,719 + 15530 mRNA_7162 0.74 0.0
1,026,939 - 15530 mRNA_7162 0.84 -1.0
1,027,073 - -0.4
1,027,086 - -0.3
1,027,379 - -0.7
1,027,620 - 15531 mRNA_7163 0.21 -1.0
1,027,631 + 15531 mRNA_7163 0.23 0.1
1,027,774 + 15531 mRNA_7163 0.39 0.1
1,028,081 + 15531 mRNA_7163 0.76 -0.6
1,028,202 - 15531 mRNA_7163 0.90 -0.4
1,028,203 - -2.0
1,028,204 + 0.1
1,028,208 - -0.9
1,028,214 + -1.5
1,028,214 + -1.2
1,028,216 + -0.9
1,028,224 - 1.0
1,028,239 + -0.3
1,028,380 + -0.4
1,028,390 + 1.0
1,028,409 - -0.2
1,028,416 + -0.2
1,028,472 - 0.5
1,028,485 + -1.4
1,028,513 + 0.1
1,028,528 + -0.6
1,028,528 - 2.5
1,028,672 - -0.1
1,028,688 + -1.6
1,028,924 + 15532 mRNA_7164 0.17 1.8
1,029,009 + 15532 mRNA_7164 0.20 0.1
1,029,195 - 15532 mRNA_7164 0.26 -0.2