Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_7148

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_7147: 15515 - Hypothetical Protein, at 994364 to 995021 15515 mRNA_7148: 15516 - KOG2246 Galactosyltransferases, at 995963 to 997965 15516 mRNA_7149: 15517 - K12733 PPIL1 peptidyl-prolyl cis-trans isomerase-like 1, at 998100 to 998920 15517

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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994,974 + -0.2
995,077 - 1.3
995,358 - -0.7
995,368 + 0.6
995,382 - 0.0
995,392 + -0.8
995,560 - -0.4
995,570 - 1.0
995,574 - 0.2
995,582 - 1.4
995,583 + 0.1
995,595 + -0.9
995,598 + 1.4
995,776 - 0.7
995,902 + 1.3
996,037 + 0.5
996,059 - -0.8
996,173 + 15516 mRNA_7148 0.10 -1.0
996,434 + 15516 mRNA_7148 0.24 -1.6
996,608 + 15516 mRNA_7148 0.32 1.6
996,609 + 15516 mRNA_7148 0.32 -0.4
996,638 - 15516 mRNA_7148 0.34 -1.4
996,967 - 15516 mRNA_7148 0.50 -0.3
997,077 + 15516 mRNA_7148 0.56 -0.2
997,920 + -0.9
998,061 + -0.3
998,061 + 0.3
998,062 - 0.8
998,242 + 15517 mRNA_7149 0.17 0.3
998,309 - 15517 mRNA_7149 0.25 -1.0
998,664 + 15517 mRNA_7149 0.69 -0.0
998,681 + 15517 mRNA_7149 0.71 -0.8
998,770 + 15517 mRNA_7149 0.82 1.8
998,795 + 15517 mRNA_7149 0.85 -1.7
998,801 - 15517 mRNA_7149 0.85 0.1
998,812 - 15517 mRNA_7149 0.87 1.0
998,941 + -0.1
998,956 + -0.7