Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6996

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6995: 15363 - K15323 TSEN34 tRNA-splicing endonuclease subunit Sen34, at 626622 to 627882 15363 mRNA_6996: 15364 - Hypothetical Protein, at 628009 to 630189 15364 mRNA_6997: 15365 - K17053 ABP140 tRNAThr (cytosine32-N3)-methyltransferase, at 630254 to 632002 15365

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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627,940 - -0.6
627,945 - -0.5
627,946 + -0.7
627,948 + 0.7
628,213 + -1.2
628,216 - -1.4
628,257 + 15364 mRNA_6996 0.11 -0.2
628,384 - 15364 mRNA_6996 0.17 0.1
628,486 + 15364 mRNA_6996 0.22 2.3
628,510 + 15364 mRNA_6996 0.23 1.1
628,653 - 15364 mRNA_6996 0.30 1.3
628,678 - 15364 mRNA_6996 0.31 0.5
628,689 - 15364 mRNA_6996 0.31 1.8
628,958 + 15364 mRNA_6996 0.44 1.2
629,009 + 15364 mRNA_6996 0.46 1.0
629,137 + 15364 mRNA_6996 0.52 -0.2
629,139 - 15364 mRNA_6996 0.52 0.5
629,248 - 15364 mRNA_6996 0.57 0.1
629,412 - 15364 mRNA_6996 0.64 1.1
629,710 - 15364 mRNA_6996 0.78 1.1
629,855 - 15364 mRNA_6996 0.85 -1.4
629,872 - 15364 mRNA_6996 0.85 -0.9
629,885 - 15364 mRNA_6996 0.86 0.3
630,289 + -0.2
630,581 - 15365 mRNA_6997 0.19 -1.0
630,641 + 15365 mRNA_6997 0.22 -2.4
630,709 - 15365 mRNA_6997 0.26 -1.6
631,029 + 15365 mRNA_6997 0.44 0.9