Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6980

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6979: 15347 - KOG2789 Putative Zn-finger protein, at 586264 to 588274 15347 mRNA_6980: 15348 - SUPERFAMILY--SSF51445, at 588631 to 590610 15348 mRNA_6981: 15349 - KOG0613 Projectin/twitchin and related proteins, at 590905 to 593177 15349

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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587,725 + 15347 mRNA_6979 0.73 -1.0
587,815 + 15347 mRNA_6979 0.77 1.1
587,979 + 15347 mRNA_6979 0.85 2.1
587,984 - 15347 mRNA_6979 0.86 1.3
588,227 - 2.1
588,266 - 0.1
588,272 + 0.4
588,392 - -1.1
588,569 + 0.1
588,581 - -0.1
588,585 + -0.4
588,586 - -3.5
588,694 - -0.7
588,730 - -1.3
588,752 - -0.2
589,042 + 15348 mRNA_6980 0.21 0.3
589,193 - 15348 mRNA_6980 0.28 -1.5
589,197 + 15348 mRNA_6980 0.29 -0.3
589,254 + 15348 mRNA_6980 0.31 -0.2
589,291 - 15348 mRNA_6980 0.33 0.0
589,317 + 15348 mRNA_6980 0.35 0.4
589,331 - 15348 mRNA_6980 0.35 -2.0
589,338 + 15348 mRNA_6980 0.36 -1.9
589,577 - 15348 mRNA_6980 0.48 -0.0
589,767 + 15348 mRNA_6980 0.57 0.4
590,182 + 15348 mRNA_6980 0.78 0.2
590,613 + -0.5
590,636 + 0.7
591,064 + -1.1
591,317 - 15349 mRNA_6981 0.18 -0.1
591,375 + 15349 mRNA_6981 0.21 -1.7
591,480 + 15349 mRNA_6981 0.25 -1.4
591,514 + 15349 mRNA_6981 0.27 0.8