Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6942

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6941: 15309 - K02154 ATPeV0A, ATP6N V-type H+-transporting ATPase subunit a, at 487367 to 491016 15309 mRNA_6942: 15310 - K15029 EIF3L translation initiation factor 3 subunit L, at 491144 to 493608 15310 mRNA_6943: 15311 - SUPERFAMILY--SSF52047, at 493796 to 495109 15311

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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491,071 + 0.6
491,078 + 0.1
491,091 - -0.5
491,109 + 0.2
491,112 - 0.2
491,116 + -0.6
491,254 + 0.8
491,838 - 15310 mRNA_6942 0.28 -0.7
491,953 - 15310 mRNA_6942 0.33 2.3
491,997 - 15310 mRNA_6942 0.35 -0.1
492,142 + 15310 mRNA_6942 0.40 0.4
493,289 - 15310 mRNA_6942 0.87 0.3
493,292 + 15310 mRNA_6942 0.87 -0.6
493,434 - -0.4
493,440 + 0.5
493,506 + -0.5
493,854 - 0.6
493,894 + 1.3
494,151 - 15311 mRNA_6943 0.27 -0.3
494,172 + 15311 mRNA_6943 0.29 -0.4
494,444 + 15311 mRNA_6943 0.49 0.8