Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6887

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6886: 15254 - K09493 CCT1, TCP1 T-complex protein 1 subunit alpha, at 356245 to 358443 15254 mRNA_6887: 15255 - KOG2793 Putative N2,N2-dimethylguanosine tRNA methyltransferase, at 358644 to 359526 15255 mRNA_6888: 15256 - K04422 MAP3K13, LZK mitogen-activated protein kinase kinase kinase 13, at 359759 to 363523 15256

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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358,619 - 0.6
358,634 + 0.4
358,644 + 0.7
358,644 + 1.4
358,801 - 15255 mRNA_6887 0.18 -0.2
359,074 + 15255 mRNA_6887 0.49 0.2
359,368 - 15255 mRNA_6887 0.82 -0.3
359,535 - -1.6
359,626 + -0.1
359,643 + -0.3
359,666 + -0.6
359,767 + -1.4
359,771 - -0.1