Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6852

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6852: 15220 - KOG1337 N-methyltransferase, at 277485 to 279463 15220 mRNA_6853: 15221 - Interpro Altered inheritance of mitochondria 5, at 279894 to 280567 15221

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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276,506 - 0.5
276,515 + -0.3
276,525 - 0.4
276,615 - -2.6
276,639 - -0.6
276,952 + -0.6
277,098 + 0.2
277,105 + -0.2
277,112 + -1.1
277,121 - -2.0
277,267 - -0.6
277,404 + -0.2
277,447 + 0.7
277,447 + -0.0
277,579 - -0.6
277,735 - 15220 mRNA_6852 0.13 0.0
277,743 - 15220 mRNA_6852 0.13 -0.4
278,006 + 15220 mRNA_6852 0.26 1.2
278,388 + 15220 mRNA_6852 0.46 -0.1
278,391 - 15220 mRNA_6852 0.46 0.0
279,322 + 2.7
279,323 - -0.3
279,460 + 1.6
279,629 - -0.4
279,750 - 0.1
280,076 + 15221 mRNA_6853 0.27 0.8
280,083 - 15221 mRNA_6853 0.28 -0.4
280,325 - 15221 mRNA_6853 0.64 -0.2
280,326 - 15221 mRNA_6853 0.64 -0.1
280,328 - 15221 mRNA_6853 0.64 -1.4
280,344 + 15221 mRNA_6853 0.67 0.9
280,433 - 15221 mRNA_6853 0.80 0.3