Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6819

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6817: 15185 - KOG3525 Subtilisin-like proprotein convertase, at 203064 to 206112 15185 mRNA_6818: 15186 - KOG0729 26S proteasome regulatory complex, ATPase RPT1, at 206564 to 206841 15186 mRNA_6819: 15187 - SUPERFAMILY--SSF103107, at 207013 to 207504 15187 mRNA_6820: 15188 - K00931 proB glutamate 5-kinase, at 207707 to 209492 15188

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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206,044 - 1.3
206,810 + 15186 mRNA_6818 0.88 -0.5
207,205 + 15187 mRNA_6819 0.39 2.8
207,368 - 15187 mRNA_6819 0.72 1.3
207,378 + 15187 mRNA_6819 0.74 0.4
207,383 + 15187 mRNA_6819 0.75 2.0
207,401 + 15187 mRNA_6819 0.79 0.8
207,410 + 15187 mRNA_6819 0.81 1.5
207,479 - 1.5
207,518 + 0.6
207,525 - -1.2
207,527 - 3.0
207,532 - 1.4
207,564 + -0.4
207,589 - -3.1
207,682 - 0.8