Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6804

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6803: 15171 - KOG3131 Uncharacterized conserved protein, at 172404 to 173557 15171 mRNA_6804: 15172 - HMMPfam-CFEM domain-PF05730, at 173731 to 174873 15172 mRNA_6805: 15173 - Hypothetical Protein, at 174992 to 176183 15173

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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172,859 + 15171 mRNA_6803 0.39 0.1
172,870 - 15171 mRNA_6803 0.40 -0.1
173,001 + 15171 mRNA_6803 0.52 2.5
173,129 + 15171 mRNA_6803 0.63 -1.2
173,163 + 15171 mRNA_6803 0.66 -0.4
173,273 - 15171 mRNA_6803 0.75 0.3
173,436 + 15171 mRNA_6803 0.89 0.0
173,439 - 15171 mRNA_6803 0.90 -2.6
173,604 - 2.4
173,712 - -0.4
173,750 + -1.2
173,769 - -0.1
173,769 + 0.5
173,769 - -1.2
173,770 + 0.0
173,770 - -0.5
173,771 - 0.2
173,778 + -0.9
173,784 + -1.0
173,784 - -0.2
173,791 + 1.0
173,793 + 0.7
173,905 - 15172 mRNA_6804 0.15 -1.9
173,915 - 15172 mRNA_6804 0.16 0.7
173,916 - 15172 mRNA_6804 0.16 -0.9
173,928 + 15172 mRNA_6804 0.17 0.2
173,953 + 15172 mRNA_6804 0.19 0.4
173,974 + 15172 mRNA_6804 0.21 -1.3
174,101 + 15172 mRNA_6804 0.32 1.3
174,342 - 15172 mRNA_6804 0.53 0.2
174,637 + 15172 mRNA_6804 0.79 0.9
174,640 - 15172 mRNA_6804 0.80 0.7
174,658 + 15172 mRNA_6804 0.81 1.5
174,749 + 15172 mRNA_6804 0.89 1.7
174,755 + 15172 mRNA_6804 0.90 -0.8
175,006 + -0.4
175,139 + 15173 mRNA_6805 0.12 0.0
175,378 + 15173 mRNA_6805 0.32 -0.8
175,381 - 15173 mRNA_6805 0.33 -0.2
175,460 + 15173 mRNA_6805 0.39 -0.8
175,841 + 15173 mRNA_6805 0.71 -0.1