Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6791

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6790: 15158 - K00671 E2.3.1.97, NMT glycylpeptide N-tetradecanoyltransferase, at 133483 to 136016 15158 mRNA_6791: 15159 - K00888 PI4KA phosphatidylinositol 4-kinase A, at 136109 to 143352 15159 mRNA_6792: 15160 - K14396 PABPN1, PABP2 polyadenylate-binding protein 2, at 143720 to 144685 15160

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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136,054 - 1.4
136,066 - -0.2
136,069 - -0.1
136,071 + -2.3
136,079 + -0.9
136,093 + -0.0
136,093 + -1.4
137,994 - 15159 mRNA_6791 0.26 2.1
138,144 + 15159 mRNA_6791 0.28 -1.6
139,098 - 15159 mRNA_6791 0.41 -0.5
143,407 + -0.3
143,850 - 15160 mRNA_6792 0.13 -0.5
143,906 + 15160 mRNA_6792 0.19 -0.2
144,023 + 15160 mRNA_6792 0.31 1.0
144,186 + 15160 mRNA_6792 0.48 -0.5