Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6727

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6726: 15094 - Hypothetical Protein, at 1736 to 3438 15094 mRNA_6727: 15095 - K00761 upp, UPRT uracil phosphoribosyltransferase, at 3595 to 4704 15095 mRNA_6728: 15096 - K14309 NUP93, NIC96 nuclear pore complex protein Nup93, at 5048 to 8579 15096

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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2,889 - 15094 mRNA_6726 0.68 0.6
2,898 + 15094 mRNA_6726 0.68 1.8
2,928 + 15094 mRNA_6726 0.70 -2.1
2,957 - 15094 mRNA_6726 0.72 -0.0
3,026 + 15094 mRNA_6726 0.76 -0.2
3,149 + 15094 mRNA_6726 0.83 -1.3
3,291 + -0.7
3,296 - -0.8
3,335 + 1.5
3,462 + 0.5
3,566 - -0.6
3,745 + 15095 mRNA_6727 0.14 1.9
3,751 - 15095 mRNA_6727 0.14 -2.5
3,878 + 15095 mRNA_6727 0.25 0.9
4,005 + 15095 mRNA_6727 0.37 0.0
4,612 - -1.3
4,639 + -0.0
4,774 - -2.2
4,889 - 0.7
4,914 + -0.1
4,918 - 0.2
4,980 - -2.8
5,104 + -1.3
5,529 - 15096 mRNA_6728 0.14 -0.2