Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6654

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6653: 15021 - K04739 PRKAR cAMP-dependent protein kinase regulator, at 1354178 to 1355889 15021 mRNA_6654: 15022 - K12462 ARHGDI, RHOGDI Rho GDP-dissociation inhibitor, at 1356168 to 1357307 15022

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,355,421 + 15021 mRNA_6653 0.73 1.0
1,355,734 + 0.3
1,356,134 - -2.2
1,357,013 + 15022 mRNA_6654 0.74 -2.4
1,357,020 + 15022 mRNA_6654 0.75 -0.9
1,357,167 - 15022 mRNA_6654 0.88 -0.0
1,357,187 + 15022 mRNA_6654 0.89 -0.4
1,357,201 - -0.3
1,357,324 + 1.3
1,357,325 - 2.8
1,357,348 + -0.0
1,357,587 - 0.8
1,357,588 - -2.9
1,357,603 + -1.4
1,357,608 + -0.9
1,357,615 + -2.0
1,357,615 + -0.1
1,357,616 - -0.2
1,357,730 + 1.1
1,357,735 - -1.1
1,357,737 - 0.9
1,357,745 + -0.3
1,357,745 + 0.1
1,357,749 + -0.3
1,357,754 - -0.2
1,357,757 + 1.8
1,357,894 + 2.4
1,357,908 + -0.6
1,357,910 + 1.8
1,358,027 - -0.0
1,358,045 - -0.4