Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6609

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6608: 14976 - HMMPfam-Yqey-like protein-PF09424,SUPERFAMILY--SSF89095, at 1235568 to 1236163 14976 mRNA_6609: 14977 - KOG1232 Proteins containing the FAD binding domain, at 1236785 to 1239365 14977 mRNA_6610: 14978 - BLAST related to MSL5-branch point bridging protein [Sporis..., at 1239560 to 1240604 14978

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,235,831 + 14976 mRNA_6608 0.44 1.1
1,236,345 - 0.5
1,236,486 + -0.1
1,236,609 - -0.1
1,236,619 + -0.0
1,236,638 + -0.3
1,236,647 + 0.3
1,236,677 - 0.4
1,236,684 - -0.0
1,236,689 + 1.4
1,236,701 - 1.1
1,236,701 + 1.5
1,236,725 + -0.2
1,236,732 + -0.5
1,237,709 + 14977 mRNA_6609 0.36 -1.1
1,237,899 + 14977 mRNA_6609 0.43 -0.6
1,238,580 + 14977 mRNA_6609 0.70 1.2
1,238,650 + 14977 mRNA_6609 0.72 0.5
1,239,011 + 14977 mRNA_6609 0.86 2.2
1,239,297 + -1.2
1,239,298 - 1.2
1,239,299 + -0.7
1,239,329 + -1.3
1,239,744 - 14978 mRNA_6610 0.18 1.3
1,239,903 + 14978 mRNA_6610 0.33 -0.5