Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6488

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6487: 14855 - K11237 BEM1 bud emergence protein 1, at 902586 to 904816 14855 mRNA_6488: 14856 - K01655 LYS21, LYS20 homocitrate synthase, at 905172 to 907549 14856 mRNA_6489: 14857 - KOG0327 Translation initiation factor 4F, helicase subunit (eIF-4A) and related helicases, at 907944 to 911303 14857

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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904,618 + -0.0
904,857 - -0.1
904,883 - -2.4
904,883 - 0.9
904,897 - -0.2
904,899 + -0.1
904,899 - 0.4
904,922 - 0.6
904,923 + 0.0
904,994 + -1.5
904,998 - -0.1
905,047 - -1.6
905,050 + -0.7
905,059 + -0.7
905,073 - 0.4
905,075 - 0.6
905,089 - -2.8
905,091 - -2.1
905,092 + -1.0
905,093 + 0.6
905,110 - -0.3
905,408 - -1.0
905,562 + 14856 mRNA_6488 0.16 -1.5
907,277 - 14856 mRNA_6488 0.89 -4.4
907,654 + -3.0
907,770 + -0.8
907,797 - -0.6
907,831 + -0.7
907,895 - 1.1
908,062 - -0.1
908,078 + 0.2
908,123 - 1.5
908,235 - 0.9
908,378 + 14857 mRNA_6489 0.13 -1.3