Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6430

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6429: 14797 - BLAST putative protein [Melanopsichium pennsylvanicum 4], at 784165 to 784634 14797 mRNA_6430: 14798 - KOG3112 Uncharacterized conserved protein, at 785004 to 786145 14798 mRNA_6431: 14799 - Hypothetical Protein, at 786526 to 787659 14799

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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784,012 - 1.3
784,055 + -1.2
784,070 + -2.0
784,077 + 0.0
784,084 - -1.7
784,122 + -0.5
784,258 - 14797 mRNA_6429 0.20 0.1
784,479 + 14797 mRNA_6429 0.67 -1.1
784,808 - -1.0
784,827 - 0.3
784,827 + 0.1
784,924 + 1.2
784,941 - -1.3
784,968 + -1.9
784,972 - -2.1
784,976 + 0.4
784,980 + -0.1
785,096 + 2.7
785,100 - 0.0
785,101 + 0.3
785,103 + -0.3
785,113 - 1.9
785,124 - 14798 mRNA_6430 0.11 1.3
785,141 - 14798 mRNA_6430 0.12 0.0
785,358 - 14798 mRNA_6430 0.31 1.0
785,406 - 14798 mRNA_6430 0.35 -1.9
785,406 - 14798 mRNA_6430 0.35 1.2
785,481 - 14798 mRNA_6430 0.42 -2.5
785,797 + 14798 mRNA_6430 0.69 -2.2
785,970 - 14798 mRNA_6430 0.85 0.1
786,141 + -1.9
786,150 - -0.2
786,260 + 0.8
786,263 - 2.4
786,270 - -0.0
786,379 - -0.6
786,424 - -0.2
786,425 - 0.1
786,563 - -0.8
786,575 + -0.4
787,076 - 14799 mRNA_6431 0.49 -3.1