Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6405

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6404: 14772 - K20280 TRAPPC5, TRS31 trafficking protein particle complex subunit 5, at 733806 to 734712 14772 mRNA_6405: 14773 - KOG0725 Reductases with broad range of substrate specificities, at 734995 to 736035 14773 mRNA_6406: 14774 - KOG0255 Synaptic vesicle transporter SVOP and related transporters (major facilitator superfamily), at 736897 to 739297 14774

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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734,107 + 14772 mRNA_6404 0.33 -0.5
735,088 - -0.1
735,159 - 14773 mRNA_6405 0.16 -0.3
735,500 - 14773 mRNA_6405 0.49 -2.6
735,657 + 14773 mRNA_6405 0.64 0.2
735,749 - 14773 mRNA_6405 0.72 -1.1
735,768 - 14773 mRNA_6405 0.74 -1.5
735,781 - 14773 mRNA_6405 0.76 0.7
735,919 - 14773 mRNA_6405 0.89 -0.7
736,093 + 0.9
736,096 - -2.2
736,097 + 0.1
736,098 + -0.5
736,099 - -0.6
736,235 - 0.7
736,382 - 1.0
736,444 + -1.6
736,537 + 0.7
736,674 + -0.2
736,682 + -0.5
736,694 - -0.5
736,831 - 1.9