Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6348

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6347: 14715 - Hypothetical Protein, at 601204 to 601756 14715 mRNA_6348: 14716 - K11373 ELP1, IKI3, IKBKAP elongator complex protein 1, at 601835 to 607122 14716 mRNA_6349: 14717 - BLAST NADH dehydrogenase [ubiquinone] 1 beta subcomplex..., at 607266 to 607793 14717

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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601,040 + -0.0
601,193 + -0.8
601,341 + 14715 mRNA_6347 0.25 1.5
601,464 - 14715 mRNA_6347 0.47 -0.9
601,481 + 14715 mRNA_6347 0.50 0.3
601,487 - 14715 mRNA_6347 0.51 0.3
601,649 - 14715 mRNA_6347 0.80 -2.3
601,747 - -0.2
601,761 - -0.2
601,801 + 1.1
601,938 - 0.1
602,339 - -1.6
602,816 - 14716 mRNA_6348 0.19 0.5
603,086 - 14716 mRNA_6348 0.24 -2.2
603,255 + 14716 mRNA_6348 0.27 0.7
603,280 - 14716 mRNA_6348 0.27 -0.3
603,764 - 14716 mRNA_6348 0.36 0.3
604,172 + 14716 mRNA_6348 0.44 -0.0
604,399 + 14716 mRNA_6348 0.48 0.7
604,885 + 14716 mRNA_6348 0.58 0.5
605,182 - 14716 mRNA_6348 0.63 -0.9
605,636 - 14716 mRNA_6348 0.72 -0.8
606,052 - 14716 mRNA_6348 0.80 -0.9
606,922 + -0.5
607,072 - -0.4
607,107 + -1.5
607,197 + 0.6
607,202 - -0.5
607,223 - 0.6
608,075 - -0.3
608,086 - -0.4
608,122 + 0.0