Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6338

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6337: 14705 - Hypothetical Protein, at 579453 to 580646 14705 mRNA_6338: 14706 - KOG1515 Arylacetamide deacetylase, at 580711 to 582330 14706 mRNA_6339: 14707 - K03265 ETF1, ERF1 peptide chain release factor subunit 1, at 582931 to 584919 14707

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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580,091 - 14705 mRNA_6337 0.53 0.4
580,392 - 14705 mRNA_6337 0.79 0.3
580,682 - 0.8
580,804 + -0.5
581,004 + 14706 mRNA_6338 0.18 0.4
581,004 - 14706 mRNA_6338 0.18 0.3
581,272 - 14706 mRNA_6338 0.35 -0.7
581,443 + 14706 mRNA_6338 0.45 -0.9
581,714 + 14706 mRNA_6338 0.62 0.4
582,249 - 0.3
582,264 - 2.0
582,268 + -0.9
582,277 + 0.9
582,284 - 1.1
582,429 + -1.6
582,606 - -1.3
582,621 - 1.4
582,628 + -1.0