Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6285

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6284: 14652 - BLAST macrofage activating glycoprotein, putative [Rhizocto..., at 440723 to 442428 14652 mRNA_6285: 14653 - K05610 UCHL5, UCH37 ubiquitin carboxyl-terminal hydrolase L5, at 442614 to 443927 14653 mRNA_6286: 14654 - HMMPfam-Protein of unknown function (DUF3128)-PF11326, at 444214 to 444568 14654

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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441,851 + 14652 mRNA_6284 0.66 -1.5
441,966 + 14652 mRNA_6284 0.73 -0.3
441,970 + 14652 mRNA_6284 0.73 -0.0
442,014 + 14652 mRNA_6284 0.76 -0.1
442,155 - 14652 mRNA_6284 0.84 1.9
442,261 + 1.3
442,388 + -0.0
442,407 + -1.6
442,428 - -0.3
442,428 + -0.2
442,431 - 0.3
442,576 + -0.3
442,714 + -0.6
443,144 - 14653 mRNA_6285 0.40 -1.2
443,621 - 14653 mRNA_6285 0.77 0.5
443,866 + 3.3
444,013 - 0.7
444,722 - 0.8
444,853 - 0.2
444,867 - 0.5
444,868 - 2.0
444,872 + -0.4