Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6163

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6162: 14530 - K11427 DOT1L, DOT1 histone-lysine N-methyltransferase, H3 lysine-79 specific, at 145690 to 148355 14530 mRNA_6163: 14531 - HMMPfam-Autophagy protein 16 (ATG16)-PF08614, at 148660 to 149493 14531 mRNA_6164: 14532 - BLAST ECSIT domain-containing protein [Rhizoctonia solani A..., at 149620 to 151505 14532

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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147,768 - 14530 mRNA_6162 0.78 -1.0
148,090 + -0.6
148,392 - -0.7
148,511 - 0.0
148,533 - -1.0
148,729 + -0.1
148,995 + 14531 mRNA_6163 0.40 0.3
149,271 + 14531 mRNA_6163 0.73 -0.2
149,277 - 14531 mRNA_6163 0.74 -0.8
149,427 + -1.7
149,535 - 0.5
149,552 + 0.6
149,554 - -1.1
149,556 - 0.7
149,578 + 0.6