Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6100

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6099: 14467 - KOG3091 Nuclear pore complex, p54 component (sc Nup57), at 1652457 to 1654232 14467 mRNA_6100: 14468 - Hypothetical Protein, at 1655150 to 1656189 14468

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,654,394 - -2.1
1,654,396 - -0.4
1,654,542 + 0.0
1,654,579 - 0.7
1,654,684 - -1.3
1,654,692 - -0.1
1,654,696 + 0.4
1,654,821 - 0.1
1,654,828 + -0.3
1,654,828 + 2.3
1,654,831 - -0.5
1,654,831 - -0.5
1,654,994 - 0.6
1,655,108 + -0.1
1,655,124 - 0.2
1,655,135 + -1.2
1,655,297 + 14468 mRNA_6100 0.14 -2.5
1,655,384 - 14468 mRNA_6100 0.23 0.6
1,655,391 - 14468 mRNA_6100 0.23 -0.1
1,655,405 - 14468 mRNA_6100 0.25 0.6
1,655,469 - 14468 mRNA_6100 0.31 2.7
1,655,632 + 14468 mRNA_6100 0.46 0.7
1,655,653 + 14468 mRNA_6100 0.48 0.7
1,655,946 - 14468 mRNA_6100 0.77 2.5
1,656,218 + 0.5
1,656,241 + 0.6
1,656,270 + -0.9
1,656,273 + 0.7
1,656,326 - -0.6
1,656,332 - -0.4
1,656,374 + 0.0
1,656,398 + 0.5
1,656,407 + 0.5
1,656,415 - -1.4
1,656,577 + 0.1
1,656,593 + 3.1
1,656,681 - -0.6
1,656,705 - -0.6
1,656,862 + -0.7
1,656,865 - -0.0
1,656,865 + -1.5
1,656,865 - 0.4
1,656,865 - 0.8
1,656,867 - -0.2
1,656,880 + 1.0
1,656,884 + 1.0
1,657,025 - 0.4
1,657,151 - 1.1
1,657,155 - -1.0
1,657,162 + -0.6
1,657,179 + -2.2
1,657,186 + 1.6