Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6083

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6082: 14450 - K03010 RPB2, POLR2B DNA-directed RNA polymerase II subunit RPB2, at 1603316 to 1607774 14450 mRNA_6083: 14451 - Hypothetical Protein, at 1607969 to 1610179 14451 mRNA_6084: 14452 - SUPERFAMILY--SSF54427, at 1610344 to 1611077 14452

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,608,041 - -0.4
1,608,198 - 14451 mRNA_6083 0.10 -0.9
1,608,205 + 14451 mRNA_6083 0.11 -1.5
1,608,205 + 14451 mRNA_6083 0.11 -0.3
1,608,208 - 14451 mRNA_6083 0.11 1.7
1,608,208 - 14451 mRNA_6083 0.11 0.2
1,608,314 + 14451 mRNA_6083 0.16 4.8
1,608,338 + 14451 mRNA_6083 0.17 0.0
1,608,472 - 14451 mRNA_6083 0.23 -0.2
1,608,588 + 14451 mRNA_6083 0.28 -0.5
1,608,604 + 14451 mRNA_6083 0.29 -0.9
1,608,808 - 14451 mRNA_6083 0.38 -2.3
1,608,925 + 14451 mRNA_6083 0.43 0.7
1,608,928 + 14451 mRNA_6083 0.43 1.5
1,608,929 - 14451 mRNA_6083 0.43 -1.7
1,609,320 - 14451 mRNA_6083 0.61 -0.2
1,609,385 - 14451 mRNA_6083 0.64 2.2
1,609,638 - 14451 mRNA_6083 0.75 0.9
1,609,780 - 14451 mRNA_6083 0.82 -0.2
1,609,900 + 14451 mRNA_6083 0.87 -1.2
1,610,063 - 0.1
1,610,195 - -0.3
1,610,205 + -0.2
1,610,228 - 0.6
1,610,249 + -0.6
1,610,256 + 0.1
1,610,284 + 2.0
1,610,365 - -0.9
1,610,366 + 0.3
1,610,484 - 14452 mRNA_6084 0.19 1.0
1,610,667 + 14452 mRNA_6084 0.44 -0.3
1,610,677 + 14452 mRNA_6084 0.45 0.3
1,610,685 + 14452 mRNA_6084 0.46 0.1
1,610,704 + 14452 mRNA_6084 0.49 1.7
1,610,721 - 14452 mRNA_6084 0.51 0.4
1,610,725 + 14452 mRNA_6084 0.52 -0.4
1,611,124 + -0.4