Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6079

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6078: 14446 - HMMPfam-Essential protein Yae1, N terminal-PF09811, at 1592607 to 1593994 14446 mRNA_6079: 14447 - K12776 MEK1 meiosis-specific serine/threonine-protein kinase MEK1, at 1594108 to 1596398 14447 mRNA_6080: 14448 - KOG4379 Uncharacterized conserved protein (tumor antigen CML66 in humans), at 1596741 to 1598901 14448

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,594,101 - -0.9
1,594,334 - -1.8
1,594,381 + 14447 mRNA_6079 0.12 -0.0
1,594,385 - 14447 mRNA_6079 0.12 -0.7
1,594,442 + 14447 mRNA_6079 0.15 1.2
1,594,444 + 14447 mRNA_6079 0.15 0.6
1,594,489 - 14447 mRNA_6079 0.17 1.8
1,594,505 - 14447 mRNA_6079 0.17 -0.7
1,594,506 + 14447 mRNA_6079 0.17 0.9
1,594,626 - 14447 mRNA_6079 0.23 -1.3
1,594,708 + 14447 mRNA_6079 0.26 -0.2
1,594,710 - 14447 mRNA_6079 0.26 -1.1
1,594,803 - 14447 mRNA_6079 0.30 3.4
1,594,829 + 14447 mRNA_6079 0.31 -0.4
1,594,924 + 14447 mRNA_6079 0.36 1.3
1,595,046 - 14447 mRNA_6079 0.41 1.7
1,595,057 + 14447 mRNA_6079 0.41 0.3
1,595,232 + 14447 mRNA_6079 0.49 1.9
1,595,236 + 14447 mRNA_6079 0.49 0.1
1,595,245 + 14447 mRNA_6079 0.50 1.2
1,595,396 + 14447 mRNA_6079 0.56 -1.6
1,595,438 + 14447 mRNA_6079 0.58 -0.4
1,595,514 - 14447 mRNA_6079 0.61 -0.5
1,595,777 - 14447 mRNA_6079 0.73 -0.9
1,595,790 - 14447 mRNA_6079 0.73 -0.4
1,595,829 + 14447 mRNA_6079 0.75 -1.2
1,595,834 - 14447 mRNA_6079 0.75 -0.2
1,595,997 + 14447 mRNA_6079 0.82 0.9
1,596,117 - 14447 mRNA_6079 0.88 -0.2
1,596,182 + -1.0
1,596,201 + 0.5
1,596,240 - -0.0
1,596,245 + 1.0
1,596,374 + 1.4
1,596,377 - -0.0
1,596,430 + 1.0
1,596,490 - -0.8
1,596,536 + -1.2
1,596,538 + 0.4
1,596,678 + -0.0
1,596,685 + 0.3
1,596,693 + 0.5