Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_6033

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_6032: 14400 - Hypothetical Protein, at 1486205 to 1487772 14400 mRNA_6033: 14401 - Hypothetical Protein, at 1488595 to 1490149 14401

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,487,595 + 14400 mRNA_6032 0.89 0.3
1,487,630 - -1.4
1,487,642 + -0.7
1,487,684 + -0.1
1,487,766 - 0.9
1,487,780 - 1.1
1,487,797 + 0.6
1,487,797 + -1.2
1,487,806 - 0.2
1,488,123 - -2.2
1,488,197 + -0.5
1,488,201 - -0.7
1,488,218 + -0.9
1,488,378 - 0.7
1,488,385 - -0.8
1,488,391 + 0.7
1,488,393 + -1.4
1,488,396 + -0.9
1,488,519 + 0.4
1,488,519 + 0.4
1,488,686 + 0.3
1,488,740 - -0.1
1,489,016 - 14401 mRNA_6033 0.27 -1.8
1,489,020 + 14401 mRNA_6033 0.27 0.2
1,489,023 - 14401 mRNA_6033 0.28 -0.3
1,489,129 + 14401 mRNA_6033 0.34 0.2
1,489,153 - 14401 mRNA_6033 0.36 0.8
1,489,158 + 14401 mRNA_6033 0.36 -0.8
1,489,232 - 14401 mRNA_6033 0.41 1.1
1,489,281 - 14401 mRNA_6033 0.44 -1.9
1,489,352 - 14401 mRNA_6033 0.49 1.3
1,489,413 + 14401 mRNA_6033 0.53 0.2
1,489,610 - 14401 mRNA_6033 0.65 0.6
1,489,641 + 14401 mRNA_6033 0.67 -3.3
1,489,687 - 14401 mRNA_6033 0.70 -0.6
1,489,693 + 14401 mRNA_6033 0.71 -0.6
1,489,841 - 14401 mRNA_6033 0.80 1.5
1,489,852 + 14401 mRNA_6033 0.81 -0.5
1,489,889 + 14401 mRNA_6033 0.83 -0.8
1,490,026 + 0.9
1,490,246 + -0.2
1,490,454 - -0.8
1,490,472 + 0.2
1,490,578 + -0.3
1,490,682 - -0.3
1,491,030 - 2.0