Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5980

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5978: 14346 - Hypothetical Protein, at 1367846 to 1369331 14346 mRNA_5979: 14347 - K12832 SF3B5, SF3B10 splicing factor 3B subunit 5, at 1369573 to 1370035 14347 mRNA_5980: 14348 - K12592 C1D, LRP1 exosome complex protein LRP1, at 1370321 to 1371409 14348 mRNA_5981: 14349 - Hypothetical Protein, at 1371994 to 1372598 14349

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,370,230 - -0.3
1,370,850 + 14348 mRNA_5980 0.49 -0.3
1,370,873 - 14348 mRNA_5980 0.51 -0.1
1,370,906 - 14348 mRNA_5980 0.54 -2.0
1,370,997 - 14348 mRNA_5980 0.62 -0.6
1,371,557 + -1.1
1,371,719 + 0.7
1,371,743 + 2.7
1,371,765 + -0.8
1,371,767 - -0.2
1,371,887 - 1.2
1,372,061 + 14349 mRNA_5981 0.11 0.4
1,372,358 - 14349 mRNA_5981 0.60 0.2