Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5960

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5959: 14327 - HMMPfam-Domain of unknown function (DUF1793)-PF08760, at 1334549 to 1337487 14327 mRNA_5960: 14328 - Hypothetical Protein, at 1337799 to 1338235 14328 mRNA_5961: 14329 - HMMPfam-F-box-like-PF12937, at 1338459 to 1339688 14329

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,337,199 + 1.5
1,337,703 + -0.9
1,337,914 + 14328 mRNA_5960 0.26 0.2
1,338,010 - 14328 mRNA_5960 0.48 -0.7
1,338,108 - 14328 mRNA_5960 0.71 3.4
1,338,117 - 14328 mRNA_5960 0.73 1.1
1,338,160 + 14328 mRNA_5960 0.83 0.2
1,338,163 + 14328 mRNA_5960 0.83 -1.9
1,338,703 - 14329 mRNA_5961 0.20 1.6
1,338,801 + 14329 mRNA_5961 0.28 1.5
1,338,835 + 14329 mRNA_5961 0.31 -0.0
1,338,886 - 14329 mRNA_5961 0.35 -2.5
1,338,886 - 14329 mRNA_5961 0.35 0.9
1,338,950 + 14329 mRNA_5961 0.40 -1.8
1,338,950 + 14329 mRNA_5961 0.40 2.2
1,339,036 + 14329 mRNA_5961 0.47 0.1
1,339,153 + 14329 mRNA_5961 0.56 -1.0