Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5862

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5862: 14230 - K14998 SURF1, SHY1 surfeit locus 1 family protein, at 1110574 to 1111803 14230 mRNA_5863: 14231 - K09281 K09281 copper-fist transcription factor, at 1112014 to 1113676 14231

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,109,618 - -0.9
1,109,640 - -0.7
1,109,850 - -0.6
1,109,924 + 0.5
1,110,058 - 0.2
1,110,192 + 0.0
1,110,777 + 14230 mRNA_5862 0.17 1.1
1,110,926 + 14230 mRNA_5862 0.29 0.6
1,111,090 + 14230 mRNA_5862 0.42 1.5
1,111,360 + 14230 mRNA_5862 0.64 1.6
1,111,634 - 14230 mRNA_5862 0.86 -0.5
1,112,077 + 0.4
1,112,234 + 14231 mRNA_5863 0.13 3.8
1,112,545 + 14231 mRNA_5863 0.32 1.1