Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5806

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5805: 14173 - HMMPfam-Ion transport protein-PF00520,SUPERFAMILY--SSF81324, at 979008 to 980217 14173 mRNA_5806: 14174 - KOG4197 FOG PPR repeat, at 980969 to 985772 14174 mRNA_5807: 14175 - HMMPfam-Protein of unknown function (DUF2638)-PF10937, at 986328 to 987350 14175

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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980,025 - 14173 mRNA_5805 0.84 1.3
980,274 - 0.0
980,277 - -0.2
980,312 + 0.3
980,312 + -0.4
980,326 - -0.5
980,334 - 2.2
980,457 - 1.2
980,743 + 1.5
980,946 + 2.3
981,814 + 14174 mRNA_5806 0.18 0.8
982,114 + 14174 mRNA_5806 0.24 0.9
982,410 - 14174 mRNA_5806 0.30 0.1
982,850 + 14174 mRNA_5806 0.39 0.9
985,896 + -0.5
985,987 - 0.2
986,003 + -1.5
986,106 - -1.1
986,121 + -0.3
986,125 - -0.0
986,125 - -0.7
986,126 - -0.7
986,131 + -0.4
986,131 - -2.1
986,138 + -0.1
986,144 - 1.7
986,144 - 0.4
986,150 - 2.5
986,154 + 1.2
986,158 + 0.4
986,161 - -1.9
986,161 + 0.6
986,261 + 1.4
986,267 - -1.2
986,270 + 0.0
986,271 - 0.1
986,271 + 0.2
986,272 - 1.4
986,275 - 0.0
986,295 + -0.6
986,296 - 1.0
986,300 + -0.1
986,301 + -0.5
986,456 + 14175 mRNA_5807 0.13 -1.3