Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5764

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131 mRNA_5764: 14132 - K07404 pgl 6-phosphogluconolactonase, at 886498 to 887807 14132 mRNA_5765: 14133 - Interpro Promethin, at 888017 to 888883 14133

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
885,501 - 14131 mRNA_5763 0.39 -0.0
885,506 + 14131 mRNA_5763 0.39 2.0
885,522 - 14131 mRNA_5763 0.40 -0.6
885,528 + 14131 mRNA_5763 0.41 0.1
885,834 + 14131 mRNA_5763 0.64 0.2
886,106 + 14131 mRNA_5763 0.84 -0.4
886,107 + 14131 mRNA_5763 0.84 1.3
886,151 + 14131 mRNA_5763 0.87 -2.1
886,227 - 2.8
886,229 - 0.3
886,243 - -0.4
886,257 + 0.1
886,301 - -1.0
886,374 + 0.0
886,377 + 0.9
886,395 - -0.7
886,401 + 0.0
886,406 + -0.7
886,501 + -1.0
886,641 - 14132 mRNA_5764 0.11 -0.4
886,677 - 14132 mRNA_5764 0.14 -0.3
886,763 + 14132 mRNA_5764 0.20 -2.0
886,884 + 14132 mRNA_5764 0.29 -3.0
887,180 - 14132 mRNA_5764 0.52 0.6
887,265 + 14132 mRNA_5764 0.59 2.1
887,292 + 14132 mRNA_5764 0.61 0.1
887,426 - 14132 mRNA_5764 0.71 -1.4
887,476 + 14132 mRNA_5764 0.75 -0.6
887,735 + 0.2
887,751 + -0.5
887,751 - -0.4
887,862 - 1.1
887,865 - -1.0
887,868 + 0.2
887,884 + 0.4
887,890 + 0.7
887,894 - 1.6
887,895 + 0.1
887,895 + -1.8
887,901 + 0.5
887,904 - -0.1
887,923 + -0.1
888,201 + 14133 mRNA_5765 0.21 2.6
888,513 + 14133 mRNA_5765 0.57 -0.4
888,586 + 14133 mRNA_5765 0.66 3.7
888,611 + 14133 mRNA_5765 0.69 1.2
888,612 - 14133 mRNA_5765 0.69 0.9
888,628 + 14133 mRNA_5765 0.70 2.3
888,643 + 14133 mRNA_5765 0.72 1.9
888,733 - 14133 mRNA_5765 0.83 0.1
888,773 - 14133 mRNA_5765 0.87 0.1