Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5762

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5761: 14129 - K14997 SLC38A11 solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 11, at 881466 to 883589 14129 mRNA_5762: 14130 - SUPERFAMILY--SSF47095, at 884263 to 884826 14130 mRNA_5763: 14131 - HMMPfam-Lactonase, 7-bladed beta-propeller-PF10282,SUPERFAMILY--SSF51004, at 884981 to 886323 14131

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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883,280 - 14129 mRNA_5761 0.85 0.5
883,283 - 14129 mRNA_5761 0.86 -0.7
883,397 - 2.0
883,460 - 0.3
883,549 - -0.6
883,550 + -0.9
883,562 + -1.0
883,566 + 0.8
883,704 - -0.8
883,706 - -1.7
883,713 - 0.2
883,730 - 0.7
883,733 - -0.3
883,735 - -0.7
883,743 + -0.6
883,745 + -0.7
883,748 + -0.4
883,748 + -1.2
883,748 - 3.3
883,753 - -0.5
883,768 + 1.0
883,835 + -1.2
883,878 - 0.3
884,054 - -1.6
884,252 + -0.8
884,298 - 0.2
884,333 + 14130 mRNA_5762 0.12 1.1
884,496 - 14130 mRNA_5762 0.41 -1.0
884,655 + 14130 mRNA_5762 0.70 -2.7
884,769 - 14130 mRNA_5762 0.90 -0.8
884,782 - 0.9
884,795 - -2.2
884,795 - -0.3
884,801 + 1.3
885,080 - 0.1
885,252 + 14131 mRNA_5763 0.20 1.0
885,501 - 14131 mRNA_5763 0.39 -0.0
885,506 + 14131 mRNA_5763 0.39 2.0
885,522 - 14131 mRNA_5763 0.40 -0.6
885,528 + 14131 mRNA_5763 0.41 0.1