Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5755

Experiments: 40 hrs High Buoyancy

Add experiment(s):

Zoom: Pan:

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5755: 14123 - HMMPfam-PB1 domain-PF00564,SUPERFAMILY--SSF54277, at 868685 to 870428 14123 mRNA_5756: 14124 - HMMPfam-Myb-like DNA-binding domain-PF00249,ProSiteProfiles-Myb-like domain profile.-PS50090,ProSiteProfiles-Myb-type HTH DNA-binding domain profile.-PS51294,SMART-SANT SWI3, ADA2, N-CoR and TFIIIB'' DNA-binding domains-SM00717,SUPERFAMILY--SSF46689, at 870782 to 872057 14124

Please try another browser if this message remains

Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
remove
867,691 - -1.9
867,713 + 0.4
867,722 + -0.1
867,727 - -2.3
867,731 + -0.3
867,741 - 1.1
867,741 - 1.0
867,742 + -0.3
867,742 + -0.6
867,745 + -0.2
867,746 + -0.6
867,749 + -0.9
867,750 - -0.2
867,762 - -0.1
867,766 - 0.8
867,769 + -2.2
867,880 + 1.9
867,906 + 1.6
868,162 + -1.5
868,173 - 1.0
868,203 + 1.1
868,617 + 0.5
868,777 + 1.1
868,793 + -1.1
868,796 - -1.1
868,921 + 14123 mRNA_5755 0.14 1.3
868,925 - 14123 mRNA_5755 0.14 0.9
868,927 + 14123 mRNA_5755 0.14 -1.2
868,943 - 14123 mRNA_5755 0.15 0.3
868,959 + 14123 mRNA_5755 0.16 2.1
868,973 - 14123 mRNA_5755 0.17 0.5
869,086 + 14123 mRNA_5755 0.23 -1.1
869,816 - 14123 mRNA_5755 0.65 0.2
869,818 - 14123 mRNA_5755 0.65 -0.3
869,848 + 14123 mRNA_5755 0.67 0.1
869,983 - 14123 mRNA_5755 0.74 0.9
870,019 - 14123 mRNA_5755 0.76 0.4
870,246 - 14123 mRNA_5755 0.90 0.3
870,268 + -1.9
870,308 - -0.4
870,414 - 2.4
870,535 - -1.6
870,682 - -1.1
870,722 + -0.2
870,724 + -0.1
870,726 + 0.5
870,751 + -0.2
870,787 + -0.8
870,876 + -0.6
870,881 - -0.4
871,154 - 14124 mRNA_5756 0.29 0.2