Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5723

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5722: 14090 - SUPERFAMILY--SSF52047, at 770253 to 773842 14090 mRNA_5723: 14091 - K15447 TRM44, METTL19 tRNASer (uridine44-2'-O)-methyltransferase, at 774192 to 776044 14091 mRNA_5724: 14092 - K05310 GPI7 ethanolaminephosphotransferase, at 776159 to 779515 14092

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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773,403 + 14090 mRNA_5722 0.88 0.5
773,522 - 1.1
773,821 - 0.3
773,822 + 0.9
773,990 + 0.2
774,104 - -1.0
774,140 - 0.2
774,282 - -1.5
774,465 + 14091 mRNA_5723 0.15 -0.2
775,148 - 14091 mRNA_5723 0.52 -1.8
775,150 + 14091 mRNA_5723 0.52 -0.3
776,247 + 0.2
776,324 - 0.9
776,333 - -1.3
776,341 + -0.4
776,784 - 14092 mRNA_5724 0.19 -0.9
777,002 + 14092 mRNA_5724 0.25 0.0