Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5711

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5710: 14078 - K03963 NDUFB7 NADH dehydrogenase (ubiquinone) 1 beta subcomplex subunit 7, at 747522 to 748410 14078 mRNA_5711: 14079 - KOG4654 Uncharacterized conserved protein, at 748613 to 751704 14079 mRNA_5712: 14080 - K03253 EIF3B translation initiation factor 3 subunit B, at 751962 to 754544 14080

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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748,657 - -0.0
748,797 + -1.9
748,807 + -0.8
748,919 - -2.8
748,927 - 14079 mRNA_5711 0.10 -1.3
749,100 + 14079 mRNA_5711 0.16 1.7
749,426 + 14079 mRNA_5711 0.26 -0.6
749,578 + 14079 mRNA_5711 0.31 -0.9
749,628 + 14079 mRNA_5711 0.33 -0.1
750,108 + 14079 mRNA_5711 0.48 0.0
750,366 + 14079 mRNA_5711 0.57 -1.5
750,391 - 14079 mRNA_5711 0.58 -0.4
750,392 + 14079 mRNA_5711 0.58 -1.0
750,832 + 14079 mRNA_5711 0.72 -0.1
751,098 - 14079 mRNA_5711 0.80 1.6
751,110 - 14079 mRNA_5711 0.81 -0.3
751,253 - 14079 mRNA_5711 0.85 -0.5
751,266 + 14079 mRNA_5711 0.86 -0.3
751,416 - 0.7
751,443 - -1.8
751,564 - -0.7
751,569 - 0.8
751,587 + 0.3
751,593 + 1.5
751,601 - -0.9
751,703 - 2.3
751,713 + -0.1
751,721 + 0.3
751,723 - -0.2
751,723 + -0.6
751,866 - -0.3
751,867 - 1.5