Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5688

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5687: 14055 - K08764 SCP2, SCPX sterol carrier protein 2, at 694932 to 696791 14055 mRNA_5688: 14056 - K12199 VTA1, LIP5 vacuolar protein sorting-associated protein VTA1, at 697061 to 698504 14056 mRNA_5689: 14057 - KOG4206 Spliceosomal protein snRNP-U1A/U2B, at 698626 to 699781 14057

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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696,339 - 14055 mRNA_5687 0.76 -2.8
696,597 - 14055 mRNA_5687 0.90 -0.9
696,778 - -1.6
696,904 - -1.3
696,918 - -0.2
697,523 + 14056 mRNA_5688 0.32 -2.1
697,669 + 14056 mRNA_5688 0.42 -0.6
698,209 + 14056 mRNA_5688 0.80 2.7
698,516 - 0.5
698,521 - 0.1
698,591 + -2.0
698,597 + -0.1
699,157 + 14057 mRNA_5689 0.46 0.9