Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5576

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5575: 13943 - K12873 BUD31, G10 bud site selection protein 31, at 414313 to 415303 13943 mRNA_5576: 13944 - Interpro GDP-fucose protein O-fucosyltransferase, at 415685 to 417537 13944 mRNA_5577: 13945 - Hypothetical Protein, at 418154 to 419235 13945

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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415,201 + 13943 mRNA_5575 0.90 -1.8
415,459 + 0.7
415,470 + 2.3
415,495 - -0.5
415,510 - 1.0
415,634 - 0.5
415,648 - -1.1
415,649 + 0.9
415,664 + -0.6
415,956 - 13944 mRNA_5576 0.15 1.7
415,960 + 13944 mRNA_5576 0.15 -2.8
416,079 - 13944 mRNA_5576 0.21 1.6
416,219 - 13944 mRNA_5576 0.29 0.1
416,253 + 13944 mRNA_5576 0.31 0.2
416,477 + 13944 mRNA_5576 0.43 -0.5
416,814 + 13944 mRNA_5576 0.61 -0.7
416,938 - 13944 mRNA_5576 0.68 -1.6
416,955 - 13944 mRNA_5576 0.69 -0.9
417,566 - 1.2
417,972 - 2.6
418,407 - 13945 mRNA_5577 0.23 0.5