Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5546

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5545: 13913 - Hypothetical Protein, at 342333 to 343433 13913 mRNA_5546: 13914 - Hypothetical Protein, at 343568 to 344161 13914 mRNA_5547: 13915 - K08994 yneE putative membrane protein, at 344428 to 346193 13915

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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342,741 - 13913 mRNA_5545 0.37 0.2
342,836 + 13913 mRNA_5545 0.46 -1.7
343,052 + 13913 mRNA_5545 0.65 -0.4
343,182 + 13913 mRNA_5545 0.77 1.4
343,583 - 0.3
343,619 - -0.4
343,725 + 13914 mRNA_5546 0.26 0.7
343,754 - 13914 mRNA_5546 0.31 1.6
343,801 + 13914 mRNA_5546 0.39 0.6
343,803 + 13914 mRNA_5546 0.40 -0.2
343,827 + 13914 mRNA_5546 0.44 0.4
343,873 - 13914 mRNA_5546 0.51 -1.1
343,904 - 13914 mRNA_5546 0.57 0.0
343,911 + 13914 mRNA_5546 0.58 -1.3
343,930 - 13914 mRNA_5546 0.61 -0.7
343,966 - 13914 mRNA_5546 0.67 -2.5
343,989 - 13914 mRNA_5546 0.71 0.6
344,105 - 0.5
344,134 + -1.3
344,259 + -0.3
344,398 + -0.6
344,474 - -2.2
344,842 + 13915 mRNA_5547 0.23 0.5
345,121 - 13915 mRNA_5547 0.39 -0.3
345,147 - 13915 mRNA_5547 0.41 1.0