Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5534

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5533: 13901 - Hypothetical Protein, at 314025 to 315738 13901 mRNA_5534: 13902 - K18798 AFG1, LACE1 peroxisome-assembly ATPase, at 315936 to 317983 13902 mRNA_5535: 13903 - K15305 VAC14, TAX1BP2 vacuole morphology and inheritance protein 14, at 318348 to 322384 13903

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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315,832 + -0.2
315,836 + -0.0
315,843 + -0.9
315,973 - 0.4
316,083 - -1.2
316,107 + 0.4
316,119 - 1.0
316,121 + -0.2
316,550 + 13902 mRNA_5534 0.30 -2.4
316,830 + 13902 mRNA_5534 0.44 -0.8
317,116 - 13902 mRNA_5534 0.58 1.2
317,237 - 13902 mRNA_5534 0.64 1.0
317,258 + 13902 mRNA_5534 0.65 -0.4
317,302 + 13902 mRNA_5534 0.67 -1.7
317,541 + 13902 mRNA_5534 0.78 -0.5
317,550 - 13902 mRNA_5534 0.79 0.3
317,558 + 13902 mRNA_5534 0.79 0.9
317,562 + 13902 mRNA_5534 0.79 0.7
317,699 + 13902 mRNA_5534 0.86 0.1
317,722 - 13902 mRNA_5534 0.87 -2.0
317,741 - 13902 mRNA_5534 0.88 -0.8
317,855 + 0.2
318,012 + -2.4
318,028 - 2.1
318,029 + 0.0
318,033 + 0.4
318,042 + -1.3
318,046 + -1.6
318,173 - -0.7
318,304 - 1.0
318,310 + -2.1
318,313 + 0.4
318,313 + -2.0
318,562 + -0.4