Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5518

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5518: 13886 - SUPERFAMILY--SSF49599, at 287492 to 288002 13886 mRNA_5519: 13887 - HMMPfam-TRAF-type zinc finger-PF02176,ProSiteProfiles-Zinc finger TRAF-type profile.-PS50145, at 288669 to 289832 13887

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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286,709 - -1.1
287,231 - -0.2
287,268 - 1.2
287,510 + 0.0
287,513 - -1.0
287,595 + 13886 mRNA_5518 0.20 -0.3
287,639 + 13886 mRNA_5518 0.29 1.2
287,653 + 13886 mRNA_5518 0.32 -2.6
288,039 + 0.2
288,175 - -0.1
288,198 - -1.3
288,211 + 1.2
288,263 + 0.3
288,402 - -0.6
288,497 + -0.2
288,636 - -1.5
288,900 - 13887 mRNA_5519 0.20 1.1
288,902 - 13887 mRNA_5519 0.20 1.0
288,936 - 13887 mRNA_5519 0.23 -0.0