Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5426

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5425: 13793 - K12735 PPIL4 peptidyl-prolyl cis-trans isomerase-like 4, at 70571 to 72264 13793 mRNA_5426: 13794 - K06944 K06944 uncharacterized protein, at 72728 to 74932 13794 mRNA_5427: 13795 - Hypothetical Protein, at 75255 to 76663 13795

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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72,379 - -1.2
72,650 + 0.3
72,855 + 0.9
72,976 - 13794 mRNA_5426 0.11 1.3
73,064 - 13794 mRNA_5426 0.15 2.8
73,104 - 13794 mRNA_5426 0.17 0.0
73,138 + 13794 mRNA_5426 0.19 0.4
73,147 + 13794 mRNA_5426 0.19 0.0
73,149 - 13794 mRNA_5426 0.19 -0.3
73,220 - 13794 mRNA_5426 0.22 -0.5
73,275 - 13794 mRNA_5426 0.25 0.1
73,291 + 13794 mRNA_5426 0.26 -1.6
73,297 - 13794 mRNA_5426 0.26 -0.1
73,384 - 13794 mRNA_5426 0.30 -0.4
73,453 - 13794 mRNA_5426 0.33 -0.1
73,529 + 13794 mRNA_5426 0.36 -1.3
73,568 + 13794 mRNA_5426 0.38 -0.0
73,856 + 13794 mRNA_5426 0.51 -1.9
73,988 - 13794 mRNA_5426 0.57 1.5
74,060 - 13794 mRNA_5426 0.60 -2.3
74,104 - 13794 mRNA_5426 0.62 0.7
74,154 - 13794 mRNA_5426 0.65 -0.3
74,157 + 13794 mRNA_5426 0.65 1.4
74,157 + 13794 mRNA_5426 0.65 -0.4
74,166 + 13794 mRNA_5426 0.65 -1.3
74,172 + 13794 mRNA_5426 0.65 -0.6
74,226 + 13794 mRNA_5426 0.68 -0.0
74,231 + 13794 mRNA_5426 0.68 -1.4
74,262 + 13794 mRNA_5426 0.70 -0.1
74,382 - 13794 mRNA_5426 0.75 -0.3
74,603 + 13794 mRNA_5426 0.85 -0.5
74,712 + -1.4
74,846 - -0.5
75,033 - -0.0
75,121 - -0.1
75,124 - 0.7
75,220 - 0.2
75,299 - -0.2
75,345 - 0.3
75,358 - 0.7
75,408 - 13795 mRNA_5427 0.11 0.3
75,436 - 13795 mRNA_5427 0.13 -0.4
75,568 + 13795 mRNA_5427 0.22 -0.0
75,571 - 13795 mRNA_5427 0.22 -2.3
75,573 - 13795 mRNA_5427 0.23 -0.4
75,666 - 13795 mRNA_5427 0.29 0.4
75,762 - 13795 mRNA_5427 0.36 -0.7
75,805 - 13795 mRNA_5427 0.39 -0.1