Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5348

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5348: 13716 - BLAST transmembrane protein, putative [Rhizoctonia solani A..., at 512540 to 514284 13716 mRNA_5349: 13717 - K17427 MRPL46 large subunit ribosomal protein L46, at 514418 to 515269 13717

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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511,628 - -0.2
511,643 + -0.6
511,906 - 0.7
511,914 + -0.6
512,063 + -0.4
512,192 - -2.1
512,359 - -0.3
512,521 - 0.9
512,580 - 0.7
512,613 - -0.1
512,636 + 0.3
512,767 - 13716 mRNA_5348 0.13 -1.4
512,785 - 13716 mRNA_5348 0.14 0.7
512,790 + 13716 mRNA_5348 0.14 3.0
512,822 + 13716 mRNA_5348 0.16 0.1
513,049 - 13716 mRNA_5348 0.29 -2.3
513,456 - 13716 mRNA_5348 0.52 1.2
513,505 + 13716 mRNA_5348 0.55 0.9
513,525 - 13716 mRNA_5348 0.56 0.2
513,636 + 13716 mRNA_5348 0.63 1.7
513,755 - 13716 mRNA_5348 0.70 -0.8
514,183 + -2.2
514,183 + -1.0
514,209 + 1.9
514,298 + 0.5
514,322 - -0.9