Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5308

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5307: 13675 - KOG3769 Ribonuclease III domain proteins, at 419822 to 421852 13675 mRNA_5308: 13676 - Hypothetical Protein, at 421969 to 422926 13676 mRNA_5309: 13677 - KOG0628 Aromatic-L-amino-acid/L-histidine decarboxylase, at 423149 to 425154 13677

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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421,911 - -0.9
421,918 + 0.4
421,923 - 0.4
421,933 + -0.7
421,934 + -0.4
421,940 - 0.2
421,943 + 0.3
422,063 + -0.8
422,066 + 13676 mRNA_5308 0.10 -0.5
422,071 - 13676 mRNA_5308 0.11 0.8
422,071 - 13676 mRNA_5308 0.11 1.4
422,077 - 13676 mRNA_5308 0.11 0.7
422,079 - 13676 mRNA_5308 0.11 -2.0
422,105 - 13676 mRNA_5308 0.14 0.5
422,240 + 13676 mRNA_5308 0.28 1.3
422,242 + 13676 mRNA_5308 0.28 0.0
422,275 + 13676 mRNA_5308 0.32 0.5
422,520 + 13676 mRNA_5308 0.58 0.9
422,761 - 13676 mRNA_5308 0.83 -1.1
423,117 + 0.5
423,285 + 1.1
423,411 - 13677 mRNA_5309 0.13 -0.6
423,648 + 13677 mRNA_5309 0.25 -3.3
423,669 + 13677 mRNA_5309 0.26 -0.8
423,878 - 13677 mRNA_5309 0.36 -0.3