Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5269

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5268: 13636 - K10389 TUBG tubulin gamma, at 319582 to 321853 13636 mRNA_5269: 13637 - K03320 amt, AMT, MEP ammonium transporter, Amt family, at 322459 to 324944 13637

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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321,861 - -0.9
322,020 + -2.0
322,172 + -1.1
322,177 + 0.9
322,208 - -0.7
322,212 - 0.1
322,213 - 1.4
322,217 - -0.3
322,221 + -0.6
322,221 + -1.0
322,222 + 0.0
322,222 - -0.0
322,222 + 0.3
322,232 + 1.9
322,243 + 0.3
322,254 + 1.9
322,361 - -2.6
322,377 - -0.1
322,407 + -1.6
322,525 - -0.1
322,533 - 0.4
322,656 + 0.6
322,836 + 13637 mRNA_5269 0.15 2.5
322,980 + 13637 mRNA_5269 0.21 0.6
322,992 - 13637 mRNA_5269 0.21 -2.3
323,003 - 13637 mRNA_5269 0.22 -1.3
323,010 + 13637 mRNA_5269 0.22 -0.2
323,120 + 13637 mRNA_5269 0.27 -1.5
323,417 + 13637 mRNA_5269 0.39 -0.0
323,429 + 13637 mRNA_5269 0.39 -1.1
323,559 + 13637 mRNA_5269 0.44 0.7
323,688 + 13637 mRNA_5269 0.49 0.2
324,146 - 13637 mRNA_5269 0.68 0.4
324,749 + 0.2
325,073 + -2.2
325,359 + -0.9
325,477 - -0.6
325,479 - -2.1
325,490 - -0.7
325,506 + -1.8
325,543 + 1.4
325,768 + 1.1