Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_5143

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_5143: 13511 - K12763 SOK2 protein SOK2, at 4212 to 7292 13511 mRNA_5144: 13512 - BLAST putative mit domain-containing protein [Erysiphe neca..., at 8147 to 8373 13512

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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3,478 + 0.2
3,502 + -0.1
3,509 + -1.2
3,622 + 2.2
3,622 + 2.1
3,628 + -0.2
3,641 + 0.6
3,726 - 0.6
3,741 + 1.0
3,765 + -0.5
3,803 + 1.0
4,034 + -1.0
4,475 - 0.6
4,479 - -1.1
4,526 + 13511 mRNA_5143 0.10 0.8
4,663 - 13511 mRNA_5143 0.15 1.8
4,792 + 13511 mRNA_5143 0.19 -0.8
4,817 + 13511 mRNA_5143 0.20 -1.7
4,909 + 13511 mRNA_5143 0.23 -1.6
4,931 + 13511 mRNA_5143 0.23 -1.2
4,947 - 13511 mRNA_5143 0.24 -0.0
4,976 + 13511 mRNA_5143 0.25 0.6
5,012 + 13511 mRNA_5143 0.26 3.2
5,088 + 13511 mRNA_5143 0.28 0.3
5,089 - 13511 mRNA_5143 0.28 -0.0
5,095 + 13511 mRNA_5143 0.29 0.7
5,266 + 13511 mRNA_5143 0.34 1.3
5,319 + 13511 mRNA_5143 0.36 0.1
5,364 + 13511 mRNA_5143 0.37 0.4
5,412 - 13511 mRNA_5143 0.39 1.3
5,495 + 13511 mRNA_5143 0.42 -0.0
5,674 - 13511 mRNA_5143 0.47 -1.8
5,676 + 13511 mRNA_5143 0.48 -0.8
5,836 + 13511 mRNA_5143 0.53 1.0
5,960 + 13511 mRNA_5143 0.57 0.2
6,090 - 13511 mRNA_5143 0.61 0.6
6,153 + 13511 mRNA_5143 0.63 -1.2
6,260 + 13511 mRNA_5143 0.66 0.2
6,459 + 13511 mRNA_5143 0.73 -0.9
6,533 + 13511 mRNA_5143 0.75 0.9
6,561 + 13511 mRNA_5143 0.76 0.6
6,589 + 13511 mRNA_5143 0.77 -1.7
6,833 - 13511 mRNA_5143 0.85 0.7
6,846 + 13511 mRNA_5143 0.85 3.0
7,001 + -0.3
7,143 + 0.5
7,151 - 0.3
7,151 - 1.4
7,151 - -0.7
7,152 + 0.3
7,157 + -1.3
7,157 + -1.4
7,157 + 0.3
7,404 - 0.3
7,405 - -0.1
7,410 + 0.3
7,547 - -1.5
7,889 - -0.7
8,019 - 2.1
8,069 + 1.7
8,108 + 0.9
8,267 - 13512 mRNA_5144 0.53 2.6