Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4969

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4968: 13336 - KOG4464 Signaling protein RIC-8/synembryn (regulates neurotransmitter secretion), at 1432474 to 1435003 13336 mRNA_4969: 13337 - K20456 OSBP oxysterol-binding protein 1, at 1435085 to 1439408 13337 mRNA_4970: 13338 - HMMPfam-Alpha/beta hydrolase family-PF12697,SUPERFAMILY--SSF53474, at 1439835 to 1441343 13338

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,434,237 - 13336 mRNA_4968 0.70 0.6
1,434,656 - 13336 mRNA_4968 0.86 1.3
1,434,701 + 13336 mRNA_4968 0.88 1.2
1,434,840 - 1.3
1,434,956 + -1.1
1,435,405 - -0.5
1,435,812 + 13337 mRNA_4969 0.17 -0.7
1,435,884 + 13337 mRNA_4969 0.18 2.1
1,435,982 - 13337 mRNA_4969 0.21 -1.8
1,436,141 + 13337 mRNA_4969 0.24 1.7
1,436,510 + 13337 mRNA_4969 0.33 -0.8
1,436,588 + 13337 mRNA_4969 0.35 0.7
1,436,631 + 13337 mRNA_4969 0.36 0.5
1,436,659 - 13337 mRNA_4969 0.36 -1.0
1,436,933 + 13337 mRNA_4969 0.43 -1.1
1,437,204 + 13337 mRNA_4969 0.49 -1.2
1,437,365 - 13337 mRNA_4969 0.53 -0.5
1,437,436 - 13337 mRNA_4969 0.54 0.9
1,437,509 - 13337 mRNA_4969 0.56 1.2
1,437,960 + 13337 mRNA_4969 0.66 1.4
1,438,299 + 13337 mRNA_4969 0.74 1.3
1,438,372 - 13337 mRNA_4969 0.76 0.8
1,438,378 + 13337 mRNA_4969 0.76 -0.9
1,438,812 - 13337 mRNA_4969 0.86 0.2
1,438,816 + 13337 mRNA_4969 0.86 -0.2
1,439,114 - 0.6
1,439,117 + 1.2
1,439,128 + -1.9
1,439,137 + 1.6
1,439,179 + -1.3
1,439,280 + -0.3
1,439,280 + 0.6
1,439,351 - 0.4
1,439,415 - 0.8
1,439,564 + -0.6
1,439,606 + -0.1
1,439,721 + -0.1
1,439,838 + -0.7
1,439,865 + -0.6
1,440,294 - 13338 mRNA_4970 0.30 0.6