Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4824

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4823: 13191 - K12191 CHMP2A charged multivesicular body protein 2A, at 1094017 to 1095155 13191 mRNA_4824: 13192 - Hypothetical Protein, at 1095393 to 1096891 13192 mRNA_4825: 13193 - Hypothetical Protein, at 1097329 to 1098852 13193

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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1,095,125 + 0.7
1,095,132 - 1.3
1,095,139 + -3.0
1,095,149 + -0.9
1,095,246 + -2.1
1,095,296 - 1.0
1,095,463 - 1.7
1,095,537 - 0.2
1,095,592 + 13192 mRNA_4824 0.13 0.4
1,095,889 + 13192 mRNA_4824 0.33 0.9
1,095,907 + 13192 mRNA_4824 0.34 -1.6
1,096,047 - 13192 mRNA_4824 0.44 0.6
1,096,048 + 13192 mRNA_4824 0.44 0.5
1,096,048 + 13192 mRNA_4824 0.44 1.5
1,096,048 + 13192 mRNA_4824 0.44 -0.9
1,096,166 + 13192 mRNA_4824 0.52 0.7
1,096,288 + 13192 mRNA_4824 0.60 -0.6
1,096,289 - 13192 mRNA_4824 0.60 1.4
1,096,501 - 13192 mRNA_4824 0.74 0.2
1,096,572 - 13192 mRNA_4824 0.79 -0.3
1,096,720 - 13192 mRNA_4824 0.89 -2.1
1,096,833 + 0.7
1,096,880 - 1.0
1,096,883 - -0.8
1,096,886 + 0.0
1,096,891 + -1.2
1,097,028 - -0.0
1,097,034 - 1.4
1,097,513 - 13193 mRNA_4825 0.12 0.0
1,097,760 + 13193 mRNA_4825 0.28 2.6