Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4765

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4764: 13132 - K12842 SR140 U2-associated protein SR140, at 954648 to 957720 13132 mRNA_4765: 13133 - SUPERFAMILY--SSF52058, at 958000 to 961527 13133 mRNA_4766: 13134 - BLAST ribonuclease e [Moniliophthora roreri MCA 2997], at 961767 to 963160 13134

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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957,209 + 13132 mRNA_4764 0.83 -0.9
957,506 + -1.2
957,617 - -2.6
957,746 + 1.3
957,789 - -0.4
957,789 - -0.5
957,873 - -1.8
957,880 - 1.6
957,915 - 1.1
957,936 + 0.6
958,033 + -0.6
958,213 + -1.6
958,218 - -0.8
958,225 + -0.8
958,228 - 0.2
958,234 - 1.1
958,547 + 13133 mRNA_4765 0.16 -0.1
958,656 - 13133 mRNA_4765 0.19 0.4
958,679 + 13133 mRNA_4765 0.19 -0.8
958,964 + 13133 mRNA_4765 0.27 -1.3
959,148 - 13133 mRNA_4765 0.33 -0.2
959,240 + 13133 mRNA_4765 0.35 1.4
959,249 + 13133 mRNA_4765 0.35 1.7
959,539 - 13133 mRNA_4765 0.44 2.0
959,547 + 13133 mRNA_4765 0.44 0.0
959,727 + 13133 mRNA_4765 0.49 -1.4
959,993 + 13133 mRNA_4765 0.56 -0.1
959,996 + 13133 mRNA_4765 0.57 -1.3
960,016 + 13133 mRNA_4765 0.57 0.1
960,019 - 13133 mRNA_4765 0.57 -0.9
960,092 + 13133 mRNA_4765 0.59 -0.1
960,094 + 13133 mRNA_4765 0.59 -0.2
960,133 + 13133 mRNA_4765 0.60 1.0
960,147 - 13133 mRNA_4765 0.61 -0.2
960,147 - 13133 mRNA_4765 0.61 0.0
960,153 + 13133 mRNA_4765 0.61 -0.7
960,153 + 13133 mRNA_4765 0.61 -0.9
960,153 + 13133 mRNA_4765 0.61 -0.4
960,153 + 13133 mRNA_4765 0.61 -1.2
960,153 + 13133 mRNA_4765 0.61 0.6
960,198 - 13133 mRNA_4765 0.62 -2.8
960,270 - 13133 mRNA_4765 0.64 1.6
960,421 - 13133 mRNA_4765 0.69 0.2
960,449 + 13133 mRNA_4765 0.69 0.0
960,536 + 13133 mRNA_4765 0.72 -1.7
960,597 - 13133 mRNA_4765 0.74 1.6
960,635 + 13133 mRNA_4765 0.75 1.3
960,681 + 13133 mRNA_4765 0.76 -0.6
960,717 + 13133 mRNA_4765 0.77 -0.3
961,166 - 13133 mRNA_4765 0.90 -0.1
961,475 + -1.3
961,563 - 0.5
961,649 + -0.2
961,652 - -1.5
961,909 + 13134 mRNA_4766 0.10 -0.4
961,988 - 13134 mRNA_4766 0.16 0.4
961,988 - 13134 mRNA_4766 0.16 1.1
962,424 - 13134 mRNA_4766 0.47 2.4