Strain Fitness in Rhodosporidium toruloides IFO0880 around mRNA_4749

Experiments: 40 hrs High Buoyancy

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey).

500 nt mRNA_4748: 13116 - Hypothetical Protein, at 915599 to 917193 13116 mRNA_4749: 13117 - SUPERFAMILY--SSF52047, at 917502 to 919114 13117 mRNA_4750: 13118 - Hypothetical Protein, at 919411 to 921092 13118

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Per-strain Table

Position Strand Gene Sysname Fraction 40 hrs High Buoyancy
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916,516 - 13116 mRNA_4748 0.57 -0.4
916,672 + 13116 mRNA_4748 0.67 -0.3
916,674 + 13116 mRNA_4748 0.67 0.9
916,712 + 13116 mRNA_4748 0.70 -1.0
916,904 - 13116 mRNA_4748 0.82 -0.9
916,982 + 13116 mRNA_4748 0.87 -0.3
916,993 + 13116 mRNA_4748 0.87 -0.8
917,004 - 13116 mRNA_4748 0.88 0.0
917,053 + 0.2
917,057 + 0.4
917,091 - 0.3
917,373 - 0.2
917,534 - 0.1
917,551 + 0.2
917,563 + -1.4
917,675 - 13117 mRNA_4749 0.11 -1.3
917,693 - 13117 mRNA_4749 0.12 0.6
917,707 + 13117 mRNA_4749 0.13 0.9
917,714 - 13117 mRNA_4749 0.13 0.2
918,280 + 13117 mRNA_4749 0.48 -1.5
918,412 - 13117 mRNA_4749 0.56 -1.4
918,704 - 13117 mRNA_4749 0.75 -0.4
918,823 - 13117 mRNA_4749 0.82 -0.3
918,858 + 13117 mRNA_4749 0.84 1.5
918,899 - 13117 mRNA_4749 0.87 0.4
919,121 + 0.5
919,141 - -0.1
919,155 + -0.6
919,330 + 1.1
919,335 - 0.7
919,451 - 1.3
919,462 + -0.6
919,468 - 0.1
919,471 + -0.6
919,581 + 13118 mRNA_4750 0.10 -0.7
919,870 - 13118 mRNA_4750 0.27 -1.7
919,871 - 13118 mRNA_4750 0.27 -0.0